Introduction | Installation | Quick Start | Basic Redundancy Analysis | Workspace Modes | Partial RDA (Conditioning on Covariates) | Permutation Tests | Overall Model Test | Axis-wise Tests | Scaling Options | Score Extraction | Prediction | Biplot Visualization | Basic Biplot | Direct Function Call with biplotrda() | Customizing Biplots | Performance Tuning | OpenMP Threads | Help and Package Manual | Summary | References
Package: fastrda 0.2.0
fastrda: Fast Redundancy Analysis (RDA) with High-Performance 'C++' Backend
Provides a high-performance implementation of redundancy analysis (RDA) in 'C++' using 'Armadillo' and 'OpenMP'. Supports standard and partial RDA, centering, scaling, overall and axis-wise permutation tests, biplot visualization, score extraction, and prediction. Designed for large ecological, genomic, and other multivariate data sets where computational speed and memory efficiency are required.
Authors:
fastrda_0.2.0.tar.gz
fastrda_0.2.0.zip(r-4.7-x86_64)fastrda_0.2.0.zip(r-4.7-arm64)fastrda_0.2.0.zip(r-4.6-x86_64)fastrda_0.2.0.zip(r-4.6-arm64)fastrda_0.2.0.zip(r-4.5-x86_64)
fastrda_0.2.0.tgz(r-4.6-x86_64)fastrda_0.2.0.tgz(r-4.6-arm64)fastrda_0.2.0.tgz(r-4.5-x86_64)fastrda_0.2.0.tgz(r-4.5-arm64)
fastrda_0.2.0.tar.gz(r-4.7-arm64)fastrda_0.2.0.tar.gz(r-4.7-x86_64)fastrda_0.2.0.tar.gz(r-4.6-arm64)fastrda_0.2.0.tar.gz(r-4.6-x86_64)
fastrda_0.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
fastrda/json (API)
| # Install 'fastrda' in R: |
| install.packages('fastrda', repos = c('https://zcebeci.r-universe.dev', 'https://cloud.r-project.org')) |
Uses libs:
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:5ea508a015. Checks:15 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 116 | ||
| linux-devel-x86_64 | OK | 137 | ||
| source / vignettes | OK | 250 | ||
| linux-release-arm64 | OK | 124 | ||
| linux-release-x86_64 | OK | 129 | ||
| macos-release-arm64 | OK | 85 | ||
| macos-release-x86_64 | OK | 148 | ||
| macos-oldrel-arm64 | OK | 114 | ||
| macos-oldrel-x86_64 | OK | 282 | ||
| windows-devel-arm64 | OK | 338 | ||
| windows-devel-x86_64 | OK | 148 | ||
| windows-release-arm64 | OK | 326 | ||
| windows-release-x86_64 | OK | 109 | ||
| windows-oldrel-x86_64 | OK | 87 | ||
| wasm-release | OK | 123 |
Exports:anova_fastrdabiplot_scoresbiplotrdafastrdaget_sample_scoresscores
Dependencies:clicpp11farverggplot2gluegtableisobandlabelinglifecycleR6RColorBrewerRcppRcppArmadillorlangS7scalesvctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Biplot and Biplot Scores for fastrda Objects | biplot.fastrda biplotrda biplot_scores plot.fastrda print.fastrda_biplot |
| Fast Redundancy Analysis and Associated Methods | anova.fastrda anova_fastrda fastrda get_sample_scores get_site_scores predict.fastrda print.anova.fastrda print.anova.fastrda.axis print.fastrda scores scores.fastrda summary.fastrda |